Data Science Training Program
Reuben Thomas
Michela Traglia
Ayushi Agrawal
This 3-session workshop will focus on the analysis of single-cell RNA-Seq data, starting from raw count matrices and progressing to network analysis of single-cell datasets. You’ll analyze data using R.
Attendance at all three sessions is required.
- October 16 : 9:00am-12:00pm: Loading data, quality control, normalization, feature selection, dimensionality reduction
- October 16: 1:00-4:00pm: Dimensionality reduction (continued), clustering, finding marker genes
- October 17: 1:00-4:00pm: Advanced discussion on normalization, differential analysis, and batch-correction
Requirements
- Familiarity with R and RStudio (e.g., reading in files, working with lists and dataframes)
- Some exposure to RNA-seq datasets
Advanced: This is an advanced workshop in the RNA-Seq Analysis series. Prior experience with RNA-Seq analysis is required. See introductory and intermediate workshops:
Visit the workshop site for more details and materials
Details
Dates
9:00am–4:00pm
1:00pm–4:00pm
Location
OnlineAudience
Gladstone and UCSFContact(s)
The Gladstone Data Science Training Program was started in 2018 to provide trainees with learning opportunities and hands-on workshops to improve their skills in bioinformatics and computational analysis. This program offers a series of workshops throughout the year to enable trainees to gain new skills and get support with their questions and data.
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Diversity, Equity, and Inclusion
At Gladstone, we are committed to providing events and professional development activities that resonate with our community’s diverse members. Our goal is to develop creative programming that encompasses a wide variety of ideas and perspectives to inspire, educate, and engage with everyone within our walls.
We want to effect positive change through our events and activities by providing a platform for discussions on important topics related to increasing diversity and inclusiveness in the sciences.