Karin Pelka’s lab studies the cellular interactions that shape immune responses in human tumors, focusing on how these responses are regulated. Using a combination of large-scale genomic analyses and tissue imaging approaches, Pelka has identified hubs in tumor tissues where tumor cells come into close contact with immune cells. By characterizing the cells in these hubs, and the gene networks that are turned on in these cells, she aims to uncover novel ways to harness the immune system in the fight against cancer.

Disease Areas

Autoimmune Diseases
Cancer Immunotherapies

Areas of Expertise

Human Immunology
Innate Immunity
Single Cell and Spatial Profiling
Systems Biology
Working in the Pelka lab

Lab Focus

Understanding how the hubs of malignant and immune cells form, how they evolve over time and how cells communicate within and between hubs.
Understanding how hubs respond to specific anti-cancer treatments.
Understanding how preexisting hubs impact future immune responses to the tumor, and generally how innate immune mechanisms shape anti-tumor immunity.

Research Impact

Immunotherapy, the use of agents that stimulate or suppress immune responses to combat disease, has revolutionized the treatment of certain types of cancer. However, many cancers are unresponsive to immunotherapy for reasons that remain poorly understood. 

Immune cells cannot execute their function in isolation, but require interactions with other immune and non-immune cells. Using a systems biology approach, Pelka discovered multiple cellular communities—or “hubs”—where malignant and immune cells interact in the tumors of patients with colorectal cancer. Furthermore, she found that tumors that were likely to respond to immunotherapy contained different types of hubs than those who don’t respond. By pursuing the characterization of immune hubs in solid tumors, Pelka and her team hope to identify molecular mechanisms that could be harnessed to design novel immunotherapies for currently non-responsive tumors.

 

Lab Members

Han Chen
Graduate Student
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Jack Demaray
Collaborator
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Alisa Dietl, MD, PhD
Postdoctoral Scholar
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Scott Engels
Collaborator
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Zuzhi Jiang
Rotation Student
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Anderson Lee
Research Associate II
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Sara Misiukiewicz
Graduate Student
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Aditya Naik, MBA
Research Associate III
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Jingya Qiu, PhD
Postdoctoral Scholar
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Anna Ralser, MD, PhD
Postdoctoral Scholar
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Wenxi Zhang
Rotation Student
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