Alex Pico, PhD
This workshop provides an introduction to pathway analysis using R. You’ll begin with a tour of common software tools and methods for functional enrichment analysis, including WikiPathways, Cytoscape, RStudio, and the R packages: clusterProfiler, rWikiPathways, and RCy3. Then, the hands-on portion will walk you through a basic enrichment analysis, including basic data visualization and exploration. You’ll be introduced to advanced topics on pathway visualization and publishing figures. There will also be time to work with your own data and project topics.
Intermediate Level: This is an intermediate workshop in the Pathway Analysis series. Prior experience with R is required. See introductory and intermediate R workshops:
The Gladstone Data Science Training Program was started in 2018 to provide trainees with learning opportunities and hands-on workshops to improve their skills in bioinformatics and computational analysis. This program offers a series of workshops throughout the year to enable trainees to gain new skills and get support with their questions and data.
Diversity, Equity, and Inclusion
At Gladstone, we are committed to providing events and professional development activities that resonate with our community’s diverse members. Our goal is to develop creative programming that encompasses a wide variety of ideas and perspectives to inspire, educate, and engage with everyone within our walls.
We want to effect positive change through our events and activities by providing a platform for discussions on important topics related to increasing diversity and inclusiveness in the sciences.